Peptide · Research Monograph · Mitochondria-targeted aromatic-cationic tetrapeptide (cardiolipin-binding)

SS-31

A mitochondria-targeting peptide for cellular energy

SS-31 (Elamipretide) is a mitochondria-targeting peptide researched for restoring cellular energy by protecting the inner membrane of the mitochondria — studied in aging, heart, and muscle research.

For laboratory research use only — not for human or animal use

Available in the Eon catalog — SS-31 from $60.00

Molecular data

Molecular formulaC32H49N9O5
Molecular weight638.8 Da
SequenceD-Arg-Dmt-Lys-Phe-NH2
Sequence length4 residues
CAS / identifierElamipretide, MTP-131, Bendavia
Physical formLyophilized powder
Available sizes10mg

How it works

Cardiolipin Binding

Inner Mitochondrial Membrane Stabilization

SS-31 selectively concentrates in the inner mitochondrial membrane (IMM) where it binds to cardiolipin — a unique phospholipid exclusive to mitochondria. This interaction stabilizes cardiolipin's structure, which is critical for cristae morphology and the assembly of electron transport chain (ETC) supercomplexes.

  • Binds cardiolipin at the inner mitochondrial membrane
  • Stabilizes ETC supercomplex assembly
  • Restores cristae morphology in damaged mitochondria
ROS Scavenging

Mitochondrial Reactive Oxygen Species Reduction

The dimethyltyrosine (Dmt) residue within SS-31's sequence confers potent antioxidant capacity concentrated at the site of ROS generation. In preclinical models of ischemia-reperfusion injury, SS-31 administration was associated with significantly reduced mitochondrial superoxide production and preserved electron transport chain efficiency.

  • Dmt residue provides targeted antioxidant capacity
  • Reduces mitochondrial superoxide generation
  • Preserves electron transport chain efficiency
ATP Synthesis

Bioenergetic Function Restoration

By preserving cardiolipin integrity and reducing oxidative damage to ETC complexes, SS-31 supports restoration of the proton gradient across the IMM and improved ATP synthase function. Preclinical data in aged rodent models demonstrated improved mitochondrial membrane potential and ATP production rates.

  • Restores mitochondrial membrane potential
  • Improves ATP synthase coupling efficiency
  • Enhances mitochondrial respiration in aged tissue models

What the research shows

Cardiology Research

Heart Failure

Phase II PROGRESS-HF trial investigated Elamipretide in heart failure with reduced ejection fraction (HFrEF). Data demonstrated improvements in cardiac output, 6-minute walk distance, and quality of life scores.

Daubert MA et al. 2017

Ischemia Research

Reperfusion Injury

In rodent models of myocardial and renal ischemia-reperfusion injury, SS-31 pretreatment and acute treatment demonstrated significant reduction in infarct size and preservation of organ function markers.

Zhao K et al. 2007

Aging Biology

Mitochondrial Aging

SS-31 administration in aged rodents was associated with improved skeletal muscle mitochondrial function, increased ATP production rates, and improved physical performance markers in published research.

Siegel MP et al. 2013

Nephrology Research

Renal Protection

SPYRAL trial and preclinical renal data demonstrated SS-31's nephroprotective potential, with reduced acute kidney injury markers and improved renal function in ischemia models.

Birk AV et al. 2013

Specification

Also Known AsElamipretide, MTP-131, Bendavia
SequenceD-Arg-Dmt-Lys-Phe-NH2
Molecular Weight638.8 Da
Molecular FormulaC32H49N9O5
TargetCardiolipin / Inner Mitochondrial Membrane
MechanismCardiolipin binding; ROS scavenging; ETC stabilization
FormLyophilized powder (5mg)
Purity≥99% (HPLC verified)
TestingThird-party HPLC, Mass Spec, Endotoxin
Storage (lyophilized)-20°C for long-term stability
Storage (reconstituted)2–8°C, use within 30 days
SolubilitySoluble in water; bacteriostatic water for reconstitution
COAIncluded with every order

Frequently asked questions

What is SS-31 and what makes it unique?

SS-31 (also known as Elamipretide, MTP-131, or Bendavia) is a synthetic aromatic-cationic tetrapeptide (D-Arg-Dmt-Lys-Phe-NH2) developed by Hazel Szeto and Peter Schiller, giving it the "SS" designation. Unlike most antioxidants, SS-31 does not simply neutralize ROS systemically — it concentrates selectively at the inner mitochondrial membrane, where it binds to cardiolipin to stabilize the architecture of the electron transport chain. This targeted mechanism has generated substantial research interest across cardiac, renal, and aging biology.

What is cardiolipin and why does SS-31's binding to it matter?

Cardiolipin is a unique phospholipid found almost exclusively in the inner mitochondrial membrane. It plays a structural role in organizing the electron transport chain supercomplexes (respirasomes) that drive ATP production. When mitochondria are damaged or aged, cardiolipin becomes oxidized (peroxidized), causing cristae disorganization and impaired ETC function. SS-31 binds cardiolipin with high affinity, protecting it from peroxidation and stabilizing ETC supercomplex assembly, which researchers hypothesize underlies its observed bioenergetic effects.

Has SS-31 been tested in human clinical trials?

Yes. Elamipretide (the clinical name for SS-31) has progressed through Phase II clinical trials. The PROGRESS-HF Phase II trial studied it in patients with heart failure with reduced ejection fraction (HFrEF). The SPYRAL trial investigated renal applications. Phase III trials have also been conducted in Barth syndrome (a rare mitochondrial cardiomyopathy). Despite clinical data, Elamipretide has not yet received FDA marketing approval for any indication.

How does SS-31 get into mitochondria?

SS-31's uptake into mitochondria is independent of the mitochondrial membrane potential, unlike many other mitochondria-targeted compounds (e.g., MitoQ). This is significant because damaged or depolarized mitochondria — the ones most in need of intervention — can still accumulate SS-31. The peptide's alternating aromatic and cationic residues facilitate spontaneous partitioning into the negatively charged inner mitochondrial membrane.

What are the main research models in which SS-31 has been studied?

SS-31 has been studied in: ischemia-reperfusion injury models (cardiac, renal, cerebral); diet-induced and genetic models of heart failure; aged skeletal muscle function studies; models of mitochondrial disease (Barth syndrome); neurodegenerative disease models; and various oxidative stress paradigms. Human clinical data exist for cardiac and renal applications.

How should SS-31 be stored and handled for research?

Store lyophilized SS-31 at -20°C, protected from light. Once reconstituted in bacteriostatic water or sterile saline, store at 2–8°C and use within 30 days. SS-31 is water-soluble and does not require DMSO for dissolution, which simplifies its handling in aqueous research systems. Always refer to published study protocols for specific concentration and vehicle guidance.

Literature

  • PubMed Elamipretide (MTP-131) in chronic heart failure: PROGRESS-HF Phase II 2017 — Daubert MA et al.
  • PubMed Cell-permeable peptide antioxidants targeted to inner mitochondrial membrane (SS-31) 2007 — Zhao K et al.
  • PubMed Elamipretide improves mitochondrial function in the failing heart 2013 — Birk AV et al.
  • PubMed MTP-131 improves skeletal muscle mitochondrial function in aged mice 2013 — Siegel MP et al.

For laboratory research use only. Not a drug, supplement, or medical product; not for human or animal use. All findings referenced are from published preclinical/laboratory research.